MicroScope User Doc
3.15.1

MicroScope Platform Overview

  • Interface
  • Annotation
  • Technical Requirements
  • Login
  • Latest news
  • Sequence and Genome selection

MaGe

  • Genome Browser
  • Gene annotation editor
  • Identical gene names
  • Overlapping CDSs
  • EC number Update
  • Annotation Summary
  • Annotation Mapping

Genomic Tools

  • Genome Overview
  • Circular Genome View
  • Tandem Duplications
  • COG Automatic Classification
  • EGGNOG Automatic Classification
  • Minimal Gene Set

Comparative Genomics

  • Genome Clustering
  • Gene phyloprofile
  • Regions of Genomic Plasticity - RGP Finder
  • Regions of Genomic Plasticity - panRGP
  • Lineplot
  • Fusion / Fission
  • PkGDB Synteny Statistics
  • RefSeq Synteny Statistics
  • Pan/Core Genome
  • Resistome
  • Virulome
  • Integron
  • Macromolecular Systems

Metabolism

  • MicroCyc
  • Kegg
  • Metabolic Profile
  • Pathway Curation
  • Secondary metabolites

Searches

  • Blast & Pattern Searches
  • Keywords Search Tool
  • Export Data

Transcriptomics

  • Getting Started
  • RNAseq Overview
  • RNAseq Read Count Analysis
  • RNASeq Differential Expression Analysis
  • RNAseq V2 Overview
  • RNAseq V2 Read Count Analysis
  • RNAseq V2 Differential Expression Analysis

Variant Discovery

  • Evolution Projects
  • PALOMA - Polymorphism Analyses in Light Of MAssive DNA sequencing

User Panel

  • Display Preferences
  • Gene Carts
  • My Favourite Organisms
  • Personal Information
  • Lost Password?
  • Access Rights Management
  • Register an Account
MicroScope User Doc
  • Docs »
  • Search
  • Edit on GitHub

© Copyright 2021 Revision 5ea1a990.